Condensed Matter Physics and Bacteria
Speaker(s): Gerard C. L. Wong
One of the unsolved problems in human health and disease is the control of pathogens, such as antibiotic-resistant forms of bacteria. In this talk, we will briefly describe three vignettes where physics-based approaches have been useful.
- Bacterial biofilms are structured multi-cellular communities that are notoriously resistant to antibiotics. By adapting algorithms from colloid physics, we translate bacteria movies into searchable databases of bacterial behavior and find new appendage-specific mechanisms for P. aeruginosa surface motility.
- We examine the mechanism of mammalian defensins, a prototypical family of host defense peptides, and show how we can use topology, coordination chemistry, and soft matter physics to construct a set of design rules for antimicrobials that punch holes in bacterial membranes.
- By using 3rd generation synchrotrons to measure the density propagator of water, we show that it is possible to make movies of hydration structure and dynamics at femtosecond timescales and sub-angstrom length scales. We use this Green’s function method to explore water dynamics in confined geometries.